Transcript: SH3PXD2B-001 OTTHUMT00000372449.1

Description

SH3 and PX domains 2B

Location

About this transcript

This transcript has 13 exons and is annotated with 31 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
SH3PXD2B-001	OTTHUMT00000372449.1	7777	911aa	OTTHUMP00000223471	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS34291	A1X283
SH3PXD2B-002	OTTHUMT00000372450.2	1394	430aa	OTTHUMP00000223472	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS78084	G3V144
SH3PXD2B-007	OTTHUMT00000489226.1	1609	444aa	OTTHUMP00000281907	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	A0A1B0GUF2	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
SH3PXD2B-004	OTTHUMT00000372452.2	471	81aa	OTTHUMP00000223473	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	H0YAU1	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
SH3PXD2B-003	OTTHUMT00000372451.1	4314	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
SH3PXD2B-005	OTTHUMT00000376247.1	390	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-

Summary

Statistics

Exons: 13 Transcript length: 7,777 bps Translation length: 911 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS34291

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 10/12/2009)

Alternative symbols

CTB-38P19.1-001

Other assemblies

This transcript maps to 172,333,499-172,454,523 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000311601

Curation Method

Manual annotation from Havana