Transcript: THG1L-005 OTTHUMT00000374000.2

Description

tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)

Location

About this transcript

This transcript has 3 exons and is annotated with 3 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
THG1L-001	OTTHUMT00000252579.2	3107	298aa	OTTHUMP00000160747	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS4341	Q9NWX6
THG1L-003	OTTHUMT00000373948.1	2261	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
THG1L-004	OTTHUMT00000373949.1	1780	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
THG1L-002	OTTHUMT00000373947.1	919	124aa	OTTHUMP00000224172	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	E5RIQ8
THG1L-005	OTTHUMT00000374000.2	576	34aa	OTTHUMP00000224920	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	H0YC78	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Summary

Statistics

Exons: 3 Transcript length: 576 bps Translation length: 34 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 28/02/2014 (Created on 12/01/2010)

Alternative symbols

AC026407.1-005

Remarks

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 157,737,910-157,739,698 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000523575

Curation Method

Manual annotation from Havana