Transcript: PHYHIP-002 OTTHUMT00000375388.2

Description

phytanoyl-CoA 2-hydroxylase interacting protein

Location

Chromosome 8: 22,219,704-22,232,101 reverse strand.

About this transcript

This transcript has 6 exons and is annotated with 6 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000163776 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	Flags
PHYHIP-001	OTTHUMT00000375390.1	3200	330aa	OTTHUMP00000224836	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS43723
PHYHIP-002	OTTHUMT00000375388.2	3099	330aa	OTTHUMP00000224835	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS43723
PHYHIP-005	OTTHUMT00000375392.2	769	248aa	OTTHUMP00000224837	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
PHYHIP-004	OTTHUMT00000375389.1	2279	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-
PHYHIP-003	OTTHUMT00000375391.1	1466	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-
PHYHIP-007	OTTHUMT00000375393.1	847	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-
PHYHIP-006	OTTHUMT00000375394.1	713	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-

Summary

Statistics

Exons: 6 Transcript length: 3,099 bps Translation length: 330 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS43723

Class

Putative protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 28/02/2014 (Created on 04/02/2010)

Alternative symbols

CTD-2530N21.2-002

Remarks

alternative 5' UTR

Other assemblies

This transcript maps to 22,219,704-22,232,101 in GRCh38 (Ensembl) coordinates.

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Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000321613

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: PHYHIP-002 OTTHUMT00000375388.2

Summary

Transcript-based displays