Transcript: ZMAT4-007 OTTHUMT00000376954.1

Description

zinc finger, matrin type 4

Location

Chromosome 8: 40,697,270-40,897,824 reverse strand.

About this transcript

This transcript has 5 exons and is annotated with 3 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000164049 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
ZMAT4-002	OTTHUMT00000376950.1	2466	229aa	OTTHUMP00000225691	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS34885	Q9H898
ZMAT4-001	OTTHUMT00000376949.1	2250	153aa	OTTHUMP00000225690	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS47848	-
ZMAT4-003	OTTHUMT00000376951.2	690	211aa	OTTHUMP00000225692	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	E5RIF5	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
ZMAT4-007	OTTHUMT00000376954.1	564	61aa	OTTHUMP00000225693	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
ZMAT4-005	OTTHUMT00000376955.1	515	46aa	OTTHUMP00000225694	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
ZMAT4-006	OTTHUMT00000376956.1	473	46aa	OTTHUMP00000225695	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
ZMAT4-004	OTTHUMT00000376957.1	571	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
ZMAT4-009	OTTHUMT00000376952.1	661	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
ZMAT4-008	OTTHUMT00000376953.1	590	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 5 Transcript length: 564 bps Translation length: 61 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 19/02/2010)

Alternative symbols

RP11-51K12.1-007

Other assemblies

This transcript maps to 40,697,270-40,897,824 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000523188

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: ZMAT4-007 OTTHUMT00000376954.1

Summary

Transcript-based displays