Transcript: PXDNL-004 OTTHUMT00000377903.1

Description

peroxidasin homolog (Drosophila)-like

Location

About this transcript

This transcript has 5 exons and is annotated with 16 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
PXDNL-002	OTTHUMT00000377905.1	4805	1463aa	OTTHUMP00000226248	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS47855	A1KZ92
PXDNL-003	OTTHUMT00000377904.1	1925	537aa	OTTHUMP00000226247	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	H0YAV0	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
PXDNL-004	OTTHUMT00000377903.1	2258	582aa	OTTHUMP00000226246	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	K4DIA6	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
PXDNL-001	OTTHUMT00000377906.1	768	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 5 Transcript length: 2,258 bps Translation length: 582 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 03/03/2010)

Alternative symbols

RP11-401H2.2-004

Remarks

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 51,319,578-51,409,421 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000522628

Curation Method

Manual annotation from Havana