Transcript: CDH17-005 OTTHUMT00000378563.1

Description

cadherin 17, LI cadherin (liver-intestine)

Location

About this transcript

This transcript has 4 exons and is annotated with 5 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
CDH17-001	OTTHUMT00000378560.1	3693	832aa	OTTHUMP00000226595	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS6260	Q12864
CDH17-003	OTTHUMT00000378562.2	2625	832aa	OTTHUMP00000226597	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS6260	Q12864
CDH17-002	OTTHUMT00000378561.1	2204	580aa	OTTHUMP00000226596	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	E7EN24
CDH17-004	OTTHUMT00000378564.2	637	147aa	OTTHUMP00000226599	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	E5RJT3	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
CDH17-005	OTTHUMT00000378563.1	565	90aa	OTTHUMP00000226598	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	H0YBL0	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Summary

Statistics

Exons: 4 Transcript length: 565 bps Translation length: 90 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 09/03/2010)

Alternative symbols

KB-1184D12.2-005

Remarks

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 94,145,969-94,162,128 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000520952

Curation Method

Manual annotation from Havana