Transcript: SWAP70-007 OTTHUMT00000386799.1

Description

SWAP switching B-cell complex 70kDa subunit

Location

Chromosome 11: 9,726,895-9,750,491 forward strand.

About this transcript

This transcript has 7 exons.

Gene

This transcript is a product of gene OTTHUMG00000165865 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
SWAP70-001	OTTHUMT00000386766.2	4882	585aa	OTTHUMP00000231344	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS31426	Q9UH65
SWAP70-002	OTTHUMT00000386794.1	3538	527aa	OTTHUMP00000231368	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS73257	E7EMB1
SWAP70-006	OTTHUMT00000386798.2	1131	226aa	OTTHUMP00000231370	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
SWAP70-007	OTTHUMT00000386799.1	977	23aa	OTTHUMP00000231371	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
SWAP70-004	OTTHUMT00000386795.1	813	149aa	OTTHUMP00000231369	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	E9PJK8
SWAP70-003	OTTHUMT00000386797.1	3006	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
SWAP70-005	OTTHUMT00000386796.1	716	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 7 Transcript length: 977 bps Translation length: 23 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 07/06/2010)

Alternative symbols

RP11-540A21.1-007

Annotation Attributes

dotter confirmed [Definitions]

Remarks

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 9,726,895-9,750,491 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000534562

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: SWAP70-007 OTTHUMT00000386799.1

Summary

Transcript-based displays