Transcript: ATP8B3-002 OTTHUMT00000388279.1

Description

ATPase, aminophospholipid transporter, class I, type 8B, member 3

Location

Chromosome 19: 1,782,075-1,812,276 reverse strand.

About this transcript

This transcript has 29 exons and is annotated with 43 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000166189 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
ATP8B3-002	OTTHUMT00000388279.1	5095	1300aa	OTTHUMP00000232124	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS45901	O60423
ATP8B3-005	OTTHUMT00000388281.2	4014	1263aa	OTTHUMP00000232125	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS54196	-
ATP8B3-001	OTTHUMT00000388283.4	2759	562aa	OTTHUMP00000236998	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	F5H3R9
ATP8B3-009	OTTHUMT00000449198.3	933	205aa	OTTHUMP00000263084	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	K7EJ52	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
ATP8B3-006	OTTHUMT00000396495.2	1318	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
ATP8B3-003	OTTHUMT00000388280.3	5237	86aa	OTTHUMP00000236996	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
ATP8B3-008	OTTHUMT00000388282.3	887	38aa	OTTHUMP00000274671	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
ATP8B3-004	OTTHUMT00000396496.2	882	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
ATP8B3-007	OTTHUMT00000388284.1	2187	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 29 Transcript length: 5,095 bps Translation length: 1,300 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS45901

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 21/06/2010)

Alternative symbols

AC004755.2-002

Remarks

alternative 5' UTR

Other assemblies

This transcript maps to 1,782,075-1,812,276 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000310127

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: ATP8B3-002 OTTHUMT00000388279.1

Summary

Transcript-based displays