Transcript: RNPC3-003 OTTHUMT00000390812.1

Description

RNA-binding region (RNP1, RRM) containing 3

Location

Chromosome 1: 103,525,699-103,555,112 forward strand.

About this transcript

This transcript has 16 exons and is annotated with 16 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000166613 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
RNPC3-003	OTTHUMT00000390812.1	3641	517aa	OTTHUMP00000233771	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS781	Q96LT9
RNPC3-008	OTTHUMT00000390816.2	1872	517aa	OTTHUMP00000233774	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS781	Q96LT9
RNPC3-001	OTTHUMT00000390810.1	2013	516aa	OTTHUMP00000233769	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-
RNPC3-005	OTTHUMT00000390813.1	768	138aa	OTTHUMP00000233772	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
RNPC3-004	OTTHUMT00000390811.1	686	185aa	OTTHUMP00000233770	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	X6RLP6	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
RNPC3-006	OTTHUMT00000390815.1	547	182aa	OTTHUMP00000233773	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	H0YEB8	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete
RNPC3-009	OTTHUMT00000390818.1	237	18aa	OTTHUMP00000233775	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
RNPC3-002	OTTHUMT00000390814.1	3658	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
RNPC3-007	OTTHUMT00000390817.1	432	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 16 Transcript length: 3,641 bps Translation length: 517 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS781

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 27/02/2014 (Created on 19/07/2010)

Alternative symbols

RP5-1108M17.7-003

Other assemblies

This transcript maps to 103,525,699-103,555,112 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000533099

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: RNPC3-003 OTTHUMT00000390812.1

Summary

Transcript-based displays