Transcript: TMPRSS13-002 OTTHUMT00000392317.1

Description

transmembrane protease, serine 13

Location

Chromosome 11: 117,902,051-117,929,365 reverse strand.

About this transcript

This transcript has 13 exons and is annotated with 26 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000166992 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt
TMPRSS13-003	OTTHUMT00000392316.1	3269	532aa	OTTHUMP00000234699	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS55788	-
TMPRSS13-001	OTTHUMT00000392320.1	2592	491aa	OTTHUMP00000234703	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS55789	-
TMPRSS13-006	OTTHUMT00000392318.1	2175	563aa	OTTHUMP00000234701	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS58185	-
TMPRSS13-002	OTTHUMT00000392317.1	1950	567aa	OTTHUMP00000234700	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS41721	E9PRA0
TMPRSS13-004	OTTHUMT00000392319.1	2361	586aa	OTTHUMP00000234702	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	J3KQC6
TMPRSS13-007	OTTHUMT00000392315.2	3183	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
TMPRSS13-005	OTTHUMT00000392321.1	578	40aa	OTTHUMP00000234704	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
TMPRSS13-008	OTTHUMT00000392322.1	653	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 13 Transcript length: 1,950 bps Translation length: 567 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS41721

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 03/08/2010)

Alternative symbols

RP11-652L8.3-002

Other assemblies

This transcript maps to 117,902,051-117,929,365 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000524993

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: TMPRSS13-002 OTTHUMT00000392317.1

Summary

Transcript-based displays