Transcript: CFAP54-003 OTTHUMT00000395046.5

Description

cilia and flagella associated 54

Location

Chromosome 12: 96,489,587-96,875,555 forward strand.

About this transcript

This transcript has 68 exons and is annotated with 15 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000167566 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
CFAP54-003	OTTHUMT00000395046.5	9766	3096aa	OTTHUMP00000236166	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS76588	Q96N23
CFAP54-013	OTTHUMT00000490450.2	6633	2067aa	OTTHUMP00000282704	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
CFAP54-004	OTTHUMT00000409790.1	2756	265aa	OTTHUMP00000244124	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
CFAP54-002	OTTHUMT00000409786.3	1967	644aa	OTTHUMP00000244123	Non stop decay	-	A0A0A0MTQ3
CFAP54-008	OTTHUMT00000409787.2	2323	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
CFAP54-007	OTTHUMT00000409789.1	802	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
CFAP54-009	OTTHUMT00000468155.1	3686	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
CFAP54-005	OTTHUMT00000409785.1	724	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
CFAP54-006	OTTHUMT00000409788.1	474	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 68 Transcript length: 9,766 bps Translation length: 3,096 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS76588

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 5, last modified on 18/02/2016 (Created on 27/08/2010)

Alternative symbols

RP11-513P18.3-003

Annotation Attributes

inferred exon combination [Definitions]

not organism-supported

Other assemblies

This transcript maps to 96,489,587-96,875,555 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000524981

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: CFAP54-003 OTTHUMT00000395046.5

Summary

Transcript-based displays