Transcript: PPP1CC-005 OTTHUMT00000404661.2

Description

protein phosphatase 1, catalytic subunit, gamma isozyme

Location

Chromosome 12: 110,719,983-110,730,755 reverse strand.

About this transcript

This transcript has 5 exons and is annotated with 5 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000169531 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
PPP1CC-001	OTTHUMT00000404659.1	2559	323aa	OTTHUMP00000241460	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS9150	A0A024RBP2
PPP1CC-002	OTTHUMT00000404660.1	1472	337aa	OTTHUMP00000241461	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS58279	-
PPP1CC-004	OTTHUMT00000404665.1	2154	332aa	OTTHUMP00000241465	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	F8W0W8
PPP1CC-010	OTTHUMT00000404666.1	1882	304aa	OTTHUMP00000241466	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	F8VYE8
PPP1CC-009	OTTHUMT00000404667.1	1581	270aa	OTTHUMP00000241467	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	F8VR82
PPP1CC-007	OTTHUMT00000404663.2	563	83aa	OTTHUMP00000241463	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
PPP1CC-011	OTTHUMT00000475031.2	582	140aa	OTTHUMP00000275220	Non stop decay	-	A0A087WYY5
PPP1CC-005	OTTHUMT00000404661.2	747	54aa	OTTHUMP00000241462	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	F8W0V8	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
PPP1CC-003	OTTHUMT00000404668.1	603	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
PPP1CC-006	OTTHUMT00000404664.1	2797	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
PPP1CC-008	OTTHUMT00000404662.1	1133	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 5 Transcript length: 747 bps Translation length: 54 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 28/02/2014 (Created on 13/01/2011)

Alternative symbols

RP11-481J8.2-005

Remarks

non canonical TEC

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 110,719,983-110,730,755 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000550261

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: PPP1CC-005 OTTHUMT00000404661.2

Summary

Transcript-based displays