Transcript: PWP1-003 OTTHUMT00000406541.1

Description

PWP1 homolog (S. cerevisiae)

Location

About this transcript

This transcript has 7 exons and is annotated with 4 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
PWP1-001	OTTHUMT00000406539.1	2621	501aa	OTTHUMP00000242457	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS9114	Q13610
PWP1-005	OTTHUMT00000406544.1	1722	439aa	OTTHUMP00000242461	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS81735	B4DJV5
PWP1-006	OTTHUMT00000406542.2	569	98aa	OTTHUMP00000242459	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
PWP1-002	OTTHUMT00000406540.1	1741	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
PWP1-003	OTTHUMT00000406541.1	851	147aa	OTTHUMP00000242458	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
PWP1-007	OTTHUMT00000406545.1	543	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 7 Transcript length: 851 bps Translation length: 147 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 28/01/2011)

Alternative symbols

RP11-864J10.5-003

Other assemblies

This transcript maps to 107,685,802-107,697,578 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000552760

Curation Method

Manual annotation from Havana