Transcript: PWP1-005 OTTHUMT00000406544.1

Description

PWP1 homolog (S. cerevisiae)

Location

About this transcript

This transcript has 15 exons and is annotated with 21 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
PWP1-001	OTTHUMT00000406539.1	2621	501aa	OTTHUMP00000242457	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS9114	Q13610
PWP1-005	OTTHUMT00000406544.1	1722	439aa	OTTHUMP00000242461	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS81735	B4DJV5
PWP1-006	OTTHUMT00000406542.2	569	98aa	OTTHUMP00000242459	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
PWP1-002	OTTHUMT00000406540.1	1741	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
PWP1-003	OTTHUMT00000406541.1	851	147aa	OTTHUMP00000242458	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
PWP1-007	OTTHUMT00000406545.1	543	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 15 Transcript length: 1,722 bps Translation length: 439 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS81735

Class

Putative protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 28/01/2011)

Alternative symbols

RP11-864J10.5-005

Other assemblies

This transcript maps to 107,686,042-107,712,412 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000541166

Curation Method

Manual annotation from Havana