Transcript: OTOGL-004 OTTHUMT00000407441.1

Description

otogelin-like

Location

About this transcript

This transcript has 13 exons and is annotated with 2 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
OTOGL-001	OTTHUMT00000407438.1	8032	2332aa	OTTHUMP00000242943	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	Q3ZCN5
OTOGL-002	OTTHUMT00000407439.1	3289	752aa	OTTHUMP00000242944	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	H7BXL6	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
OTOGL-005	OTTHUMT00000407442.1	908	266aa	OTTHUMP00000242947	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	H0YIL4	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
OTOGL-004	OTTHUMT00000407441.1	2087	166aa	OTTHUMP00000242946	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	H0YIF7	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
OTOGL-003	OTTHUMT00000407440.2	2360	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 13 Transcript length: 2,087 bps Translation length: 166 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 08/02/2011)

Alternative symbols

AC083812.1-004

Remarks

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 80,356,482-80,378,859 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000551340

Curation Method

Manual annotation from Havana