Transcript: CATSPERB-004 OTTHUMT00000411773.2

Description

cation channel, sperm-associated, beta

Location

Chromosome 14: 91,723,058-91,780,707 reverse strand.

About this transcript

This transcript has 4 exons and is annotated with 3 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000171118 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
CATSPERB-001	OTTHUMT00000411769.1	3623	1116aa	OTTHUMP00000245150	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS32142	Q9H7T0
CATSPERB-003	OTTHUMT00000411772.2	582	150aa	OTTHUMP00000245151	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	G3V2V0	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
CATSPERB-006	OTTHUMT00000411774.2	491	74aa	OTTHUMP00000245153	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	G3V352	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
CATSPERB-004	OTTHUMT00000411773.2	432	100aa	OTTHUMP00000245152	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	G3V584	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
CATSPERB-005	OTTHUMT00000411775.2	430	73aa	OTTHUMP00000245154	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	G3V352	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
CATSPERB-002	OTTHUMT00000411768.1	2229	67aa	OTTHUMP00000245149	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	H0YJA5	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
CATSPERB-008	OTTHUMT00000411771.1	1310	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
CATSPERB-007	OTTHUMT00000411770.1	752	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 4 Transcript length: 432 bps Translation length: 100 residues

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 09/07/2015 (Created on 25/03/2011)

Alternative symbols

RP11-248B24.2-004

Remarks

alternative 5' UTR

CDS end not found

mRNA end not found

Other assemblies

This transcript maps to 91,723,058-91,780,707 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000554560

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: CATSPERB-004 OTTHUMT00000411773.2

Summary

Transcript-based displays