Transcript: SHOX2-005 OTTHUMT00000412000.3

Description

short stature homeobox 2

Location

About this transcript

This transcript has 5 exons and is annotated with 10 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
SHOX2-002	OTTHUMT00000352057.3	3038	331aa	OTTHUMP00000213398	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS43164	O60902
SHOX2-001	OTTHUMT00000352056.3	2072	355aa	OTTHUMP00000213397	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS33884	-
SHOX2-003	OTTHUMT00000352058.5	1866	319aa	OTTHUMP00000213399	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS54664	-
SHOX2-005	OTTHUMT00000412000.3	439	146aa	OTTHUMP00000275371	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	A0A087WVB7	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete
SHOX2-004	OTTHUMT00000352059.4	4184	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 5 Transcript length: 439 bps Translation length: 146 residues

Class

Novel protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 3, last modified on 09/07/2015 (Created on 29/03/2011)

Alternative symbols

RP11-880C10.1-005

Remarks

CDS start not found

CDS end not found

mRNA start not found

mRNA end not found

Other assemblies

This transcript maps to 158,099,885-158,105,718 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000554685

Curation Method

Manual annotation from Havana