Transcript: LHX4-002 OTTHUMT00000415695.1

Description

LIM homeobox 4

Location

About this transcript

This transcript has 4 exons and is annotated with 2 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
LHX4-001	OTTHUMT00000084995.3	5820	390aa	OTTHUMP00000033083	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS1338	A0A0S2Z5S4
LHX4-002	OTTHUMT00000415695.1	603	151aa	OTTHUMP00000247072	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
LHX4-003	OTTHUMT00000415694.1	721	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 4 Transcript length: 603 bps Translation length: 151 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 27/02/2014 (Created on 20/05/2011)

Alternative symbols

RP5-1180C10.1-002

Remarks

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 180,248,285-180,271,894 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000561113

Curation Method

Manual annotation from Havana