Description
sorting nexin 1
Location
Chromosome 15: 64,096,000-64,138,006 forward strand.
About this transcript
This transcript has 15 exons and is annotated with 15 domains and features.
Gene
This transcript is a product of gene OTTHUMG00000172436 Show transcript tableHide transcript table
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| SNX1-003 | OTTHUMT00000418558.2 | 3373 | 557aa | OTTHUMP00000248489 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS58371 | - | |
| SNX1-001 | OTTHUMT00000418559.1 | 1971 | 522aa | OTTHUMP00000248442 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS32266 | Q13596 | |
| SNX1-002 | OTTHUMT00000418561.2 | 1374 | 457aa | OTTHUMP00000248443 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS32268 | - | |
| SNX1-004 | OTTHUMT00000418555.3 | 1869 | 304aa | OTTHUMP00000248486 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H0YK42 | |
| SNX1-010 | OTTHUMT00000418564.2 | 850 | 70aa | OTTHUMP00000248493 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H0YKT3 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| SNX1-009 | OTTHUMT00000418562.2 | 774 | 128aa | OTTHUMP00000248491 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H0YK58 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| SNX1-008 | OTTHUMT00000418556.4 | 550 | 19aa | OTTHUMP00000248487 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| SNX1-005 | OTTHUMT00000418557.3 | 8119 | 102aa | OTTHUMP00000248488 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | J3KPH4 | |
| SNX1-006 | OTTHUMT00000418560.2 | 1326 | 107aa | OTTHUMP00000248490 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | H0YKD5 | |
| SNX1-007 | OTTHUMT00000418563.2 | 753 | 111aa | OTTHUMP00000248492 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | H0YKL5 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| SNX1-012 | OTTHUMT00000418673.1 | 101 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| SNX1-014 | OTTHUMT00000418674.1 | 712 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SNX1-013 | OTTHUMT00000418672.1 | 408 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
