Transcript: ARSD-007 OTTHUMT00000418820.1

Description

arylsulfatase D

Location

About this transcript

This transcript has 5 exons and is annotated with 7 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
ARSD-001	OTTHUMT00000055636.1	5159	593aa	OTTHUMP00000022848	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS35196	A0A140VK06
ARSD-004	OTTHUMT00000055635.1	580	159aa	OTTHUMP00000022847	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	H7C327	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
ARSD-007	OTTHUMT00000418820.1	567	82aa	OTTHUMP00000248554	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	H0YMY1
ARSD-002	OTTHUMT00000055637.2	2160	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
ARSD-005	OTTHUMT00000055638.1	2032	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
ARSD-006	OTTHUMT00000055639.1	352	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
ARSD-003	OTTHUMT00000055640.2	663	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 5 Transcript length: 567 bps Translation length: 82 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 30/06/2011)

Alternative symbols

RP4-617A9.1-007

Other assemblies

This transcript maps to 2,920,676-2,929,339 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000559324

Curation Method

Manual annotation from Havana