Transcript: ONECUT1-004 OTTHUMT00000419930.2

Description

one cut homeobox 1

Location

About this transcript

This transcript has 5 exons and is annotated with 9 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
ONECUT1-001	OTTHUMT00000254849.4	2092	465aa	OTTHUMP00000162725	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS10150	Q9UBC0
ONECUT1-003	OTTHUMT00000418459.2	996	66aa	OTTHUMP00000248389	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-
ONECUT1-004	OTTHUMT00000419930.2	1638	182aa	OTTHUMP00000273513	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	U3KQR8	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
ONECUT1-002	OTTHUMT00000418458.3	583	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-

Summary

Statistics

Exons: 5 Transcript length: 1,638 bps Translation length: 182 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 28/02/2014 (Created on 14/07/2011)

Alternative symbols

AC016044.2-004

Remarks

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 52,785,725-52,789,396 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000570208

Curation Method

Manual annotation from Havana