Description
chromodomain helicase DNA binding protein 9
Location
Chromosome 16: 53,099,160-53,222,755 forward strand.
About this transcript
This transcript has 4 exons and is annotated with 5 domains and features.
Gene
This transcript is a product of gene OTTHUMG00000173188 Show transcript tableHide transcript table
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| CHD9-001 | OTTHUMT00000422338.1 | 13110 | 2881aa | OTTHUMP00000250154 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS45485 | - | |
| CHD9-003 | OTTHUMT00000422343.1 | 11504 | 2881aa | OTTHUMP00000250159 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS45485 | - | |
| CHD9-020 | OTTHUMT00000422345.1 | 11337 | 2897aa | OTTHUMP00000250161 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS76865 | Q3L8U1 | |
| CHD9-004 | OTTHUMT00000422349.2 | 3625 | 1098aa | OTTHUMP00000250162 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H3BTW3 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| CHD9-002 | OTTHUMT00000422340.1 | 2169 | 632aa | OTTHUMP00000250156 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H3BSP3 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| CHD9-012 | OTTHUMT00000422351.1 | 703 | 125aa | OTTHUMP00000250163 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| CHD9-010 | OTTHUMT00000422344.3 | 488 | 53aa | OTTHUMP00000250160 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| CHD9-011 | OTTHUMT00000422346.3 | 359 | 91aa | OTTHUMP00000258096 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| CHD9-021 | OTTHUMT00000422347.1 | 3557 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| CHD9-018 | OTTHUMT00000422358.2 | 589 | 113aa | OTTHUMP00000258950 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | J3KRH9 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| CHD9-017 | OTTHUMT00000422357.2 | 539 | 122aa | OTTHUMP00000258949 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | J3KSW5 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| CHD9-009 | OTTHUMT00000422341.2 | 968 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| CHD9-015 | OTTHUMT00000422355.1 | 824 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| CHD9-008 | OTTHUMT00000422339.1 | 720 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| CHD9-013 | OTTHUMT00000422350.1 | 485 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| CHD9-014 | OTTHUMT00000422352.1 | 242 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| CHD9-019 | OTTHUMT00000422354.2 | 8739 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| CHD9-006 | OTTHUMT00000422348.1 | 2896 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| CHD9-005 | OTTHUMT00000422353.1 | 1862 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| CHD9-016 | OTTHUMT00000422356.1 | 400 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
