HumanVega Home
Description

cadherin 8, type 2

Location
About this transcript

This transcript has 12 exons and is annotated with 43 domains and features.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtFlags
CDH8-001OTTHUMT00000268754.39721799aaOTTHUMP00000174769
 
Protein coding
CCDS10802P55286
CDH8-012OTTHUMT00000429868.38009744aaOTTHUMP00000253625
 
Protein coding
-J3KRI5
CDH8-003OTTHUMT00000429872.23986532aaOTTHUMP00000253626
 
Protein coding
-J3QLE6
CDH8-013OTTHUMT00000431170.13728745aaOTTHUMP00000254160
 
Protein coding
-X6R3Y6
CDH8-011OTTHUMT00000429874.21528425aaOTTHUMP00000253627
 
Protein coding
-J3KTG8 CDS 3' incomplete
CDH8-002OTTHUMT00000429877.255981aaOTTHUMP00000253628
 
Protein coding
--CDS 3' incomplete
CDH8-014OTTHUMT00000431244.29076476aaOTTHUMP00000254172
 
Nonsense mediated decay
-J3QKW5
CDH8-008OTTHUMT00000429870.1778No protein-
 
Processed transcript
--
CDH8-004OTTHUMT00000429876.1539No protein-
 
Processed transcript
--
CDH8-010OTTHUMT00000429869.1380No protein-
 
Processed transcript
--
CDH8-006OTTHUMT00000429878.1376No protein-
 
Processed transcript
--
CDH8-009OTTHUMT00000429871.2324No protein-
 
Processed transcript
--
CDH8-005OTTHUMT00000429875.1572No protein-
 
Retained intron
--
CDH8-007OTTHUMT00000429873.1572No protein-
 
Retained intron
--
Statistics

Exons: 12 Transcript length: 8,009 bps Translation length: 744 residues

Class

Novel protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 3, last modified on 28/02/2014 (Created on 12/08/2011)

Alternative symbols

AC092125.2-012

Annotation Attributes

not organism-supported [Definitions]

Remarks

There is another potential exon upstream of this model which would be an upstream part of the 5' UTR and would splice to the model defined here. However, it was not annotated because the alignment is poor and it was not possible to assign the splice site with confidence. However, there is reasonable support for position 357 of mouse cDNA Em:AK083092.1 and genomic coordinates 62069984 as the last base of this potential upstream exon. The first base of this potential upstream exon is 62070250

Other assemblies

This transcript maps to 61,647,242-62,021,602 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts
Ensembl transcript having exact match with Havana:
Curation Method

Manual annotation from Havana

Transcript-based displays