Transcript: FAN1-005 OTTHUMT00000430743.1

Description

FANCD2/FANCI-associated nuclease 1

Location

Chromosome 15: 30,903,912-30,943,108 forward strand.

About this transcript

This transcript has 16 exons and is annotated with 5 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000175661 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
FAN1-001	OTTHUMT00000430740.1	4891	1017aa	OTTHUMP00000253988	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS32186	Q9Y2M0
FAN1-002	OTTHUMT00000430739.1	2738	533aa	OTTHUMP00000253987	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS58344	-
FAN1-003	OTTHUMT00000430741.1	2690	533aa	OTTHUMP00000253989	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS58344	-
FAN1-004	OTTHUMT00000430742.1	2304	533aa	OTTHUMP00000253990	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS58344	-
FAN1-008	OTTHUMT00000430744.2	344	105aa	OTTHUMP00000253992	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	H3BUK3	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
FAN1-005	OTTHUMT00000430743.1	4999	430aa	OTTHUMP00000253991	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	H3BQ24
FAN1-006	OTTHUMT00000430745.1	851	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
FAN1-007	OTTHUMT00000430746.1	525	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 16 Transcript length: 4,999 bps Translation length: 430 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 17/08/2011)

Alternative symbols

RP11-540B6.4-005

Other assemblies

This transcript maps to 30,903,912-30,943,108 in GRCh38 (Ensembl) coordinates.

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Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000565280

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: FAN1-005 OTTHUMT00000430743.1

Summary

Transcript-based displays