Transcript: ITGAM-003 OTTHUMT00000432819.4

Description

integrin, alpha M (complement component 3 receptor 3 subunit)

Location

Chromosome 16: 31,275,592-31,324,439 forward strand.

About this transcript

This transcript has 5 exons and is annotated with 6 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000176612 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
ITGAM-001	OTTHUMT00000432817.2	4718	1153aa	OTTHUMP00000254641	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS54004	P11215
ITGAM-002	OTTHUMT00000432816.1	3595	1152aa	OTTHUMP00000254640	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS45470	P11215
ITGAM-008	OTTHUMT00000438858.2	516	117aa	OTTHUMP00000258859	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	I3NI33	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
ITGAM-003	OTTHUMT00000432819.4	494	165aa	OTTHUMP00000257624	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete
ITGAM-005	OTTHUMT00000432820.1	557	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
ITGAM-006	OTTHUMT00000432822.1	557	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
ITGAM-004	OTTHUMT00000432818.1	428	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
ITGAM-007	OTTHUMT00000432821.2	378	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 5 Transcript length: 494 bps Translation length: 165 residues

Class

Novel protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 4, last modified on 09/07/2015 (Created on 02/09/2011)

Alternative symbols

RP11-120K18.1-003

Remarks

CDS start not found

CDS end not found

mRNA start not found

mRNA end not found

Other assemblies

This transcript maps to 31,275,592-31,324,439 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000567031

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: ITGAM-003 OTTHUMT00000432819.4

Summary

Transcript-based displays