Transcript: PNPO-002 OTTHUMT00000441406.1

Description

pyridoxamine 5'-phosphate oxidase

Location

Chromosome 17: 47,941,571-47,947,230 forward strand.

About this transcript

This transcript has 6 exons and is annotated with 8 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000178295 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
PNPO-001	OTTHUMT00000441407.1	2397	261aa	OTTHUMP00000259056	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS11522	Q9NVS9
PNPO-002	OTTHUMT00000441406.1	1210	218aa	OTTHUMP00000259055	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-
PNPO-008	OTTHUMT00000441403.2	560	120aa	OTTHUMP00000259052	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	J3QQV6	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
PNPO-003	OTTHUMT00000441409.1	1152	69aa	OTTHUMP00000259058	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
PNPO-004	OTTHUMT00000441405.1	887	72aa	OTTHUMP00000259054	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
PNPO-005	OTTHUMT00000441404.1	537	46aa	OTTHUMP00000259053	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
PNPO-007	OTTHUMT00000441408.1	503	69aa	OTTHUMP00000259057	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
PNPO-006	OTTHUMT00000441410.1	549	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 6 Transcript length: 1,210 bps Translation length: 218 residues

Class

Novel protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 23/12/2011)

Alternative symbols

RP11-6N17.7-002

Other assemblies

This transcript maps to 47,941,571-47,947,230 in GRCh38 (Ensembl) coordinates.

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Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000434554

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: PNPO-002 OTTHUMT00000441406.1

Summary

Transcript-based displays