Description
rotatin
Location
Chromosome 18: 70,003,804-70,197,686 reverse strand.
About this transcript
This transcript has 43 exons and is annotated with 9 domains and features.
Gene
This transcript is a product of gene OTTHUMG00000178694 Show transcript tableHide transcript table
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| RTTN-001 | OTTHUMT00000442988.2 | 8088 | 2226aa | OTTHUMP00000259898 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS42443 | Q86VV8 | |
| RTTN-006 | OTTHUMT00000442989.2 | 6960 | 2200aa | OTTHUMP00000259899 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | J3KSV7 | |
| RTTN-019 | OTTHUMT00000491686.1 | 3307 | 1102aa | OTTHUMP00000283408 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete |
| RTTN-009 | OTTHUMT00000442994.2 | 2333 | 395aa | OTTHUMP00000283403 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
| RTTN-022 | OTTHUMT00000491693.1 | 892 | 298aa | OTTHUMP00000283413 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete |
| RTTN-005 | OTTHUMT00000442991.2 | 4462 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| RTTN-003 | OTTHUMT00000442992.1 | 6722 | 500aa | OTTHUMP00000259901 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | J3KTD2 | |
| RTTN-004 | OTTHUMT00000442990.1 | 6278 | 669aa | OTTHUMP00000259900 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | J3KT00 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| RTTN-007 | OTTHUMT00000442998.2 | 4801 | 690aa | OTTHUMP00000283412 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| RTTN-014 | OTTHUMT00000491679.1 | 3175 | 134aa | OTTHUMP00000283401 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| RTTN-023 | OTTHUMT00000491692.1 | 3079 | 320aa | OTTHUMP00000283411 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| RTTN-013 | OTTHUMT00000491680.1 | 2065 | 667aa | OTTHUMP00000283402 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| RTTN-021 | OTTHUMT00000491687.1 | 1357 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| RTTN-015 | OTTHUMT00000491689.1 | 982 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| RTTN-010 | OTTHUMT00000442996.1 | 783 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| RTTN-012 | OTTHUMT00000442995.1 | 669 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| RTTN-008 | OTTHUMT00000442997.1 | 572 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| RTTN-020 | OTTHUMT00000491685.1 | 5589 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| RTTN-018 | OTTHUMT00000491683.1 | 4547 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| RTTN-017 | OTTHUMT00000491690.1 | 3943 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| RTTN-002 | OTTHUMT00000442999.1 | 2355 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| RTTN-024 | OTTHUMT00000491691.1 | 2136 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| RTTN-016 | OTTHUMT00000491688.1 | 1132 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| RTTN-011 | OTTHUMT00000442993.2 | 824 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
