Transcript: SRSF1-002 OTTHUMT00000443332.1

Description

serine/arginine-rich splicing factor 1

Location

Chromosome 17: 58,004,588-58,007,261 reverse strand.

About this transcript

This transcript has 5 exons and is annotated with 17 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000178781 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
SRSF1-003	OTTHUMT00000443329.2	3117	201aa	OTTHUMP00000260039	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS58580	-
SRSF1-001	OTTHUMT00000443335.1	1513	248aa	OTTHUMP00000260045	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS11600	Q07955
SRSF1-002	OTTHUMT00000443332.1	1317	253aa	OTTHUMP00000260042	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	J3KTL2
SRSF1-006	OTTHUMT00000443333.1	568	73aa	OTTHUMP00000260043	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	J3KSW7
SRSF1-004	OTTHUMT00000443331.1	1720	201aa	OTTHUMP00000260041	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	CCDS58580	-
SRSF1-005	OTTHUMT00000443334.1	1465	65aa	OTTHUMP00000260044	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	J3QQV5
SRSF1-008	OTTHUMT00000443330.1	758	143aa	OTTHUMP00000260040	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	J3KSR8	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
SRSF1-009	OTTHUMT00000443328.1	438	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
SRSF1-007	OTTHUMT00000443336.1	689	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 5 Transcript length: 1,317 bps Translation length: 253 residues

Class

Putative protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 25/01/2012)

Alternative symbols

RP11-159D12.4-002

Other assemblies

This transcript maps to 58,004,588-58,007,261 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000584773

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: SRSF1-002 OTTHUMT00000443332.1

Summary

Transcript-based displays