Description
sorting nexin 11
Location
Chromosome 17: 48,107,549-48,119,008 forward strand.
About this transcript
This transcript has 7 exons.
Gene
This transcript is a product of gene OTTHUMG00000178822 Show transcript tableHide transcript table
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| SNX11-001 | OTTHUMT00000443423.1 | 2733 | 270aa | OTTHUMP00000260071 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS11526 | Q9Y5W9 | |
| SNX11-003 | OTTHUMT00000443426.1 | 2315 | 270aa | OTTHUMP00000260073 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS11526 | Q9Y5W9 | |
| SNX11-006 | OTTHUMT00000443428.1 | 1282 | 262aa | OTTHUMP00000260075 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS82152 | - | |
| SNX11-004 | OTTHUMT00000443420.1 | 1200 | 262aa | OTTHUMP00000260069 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS82152 | - | |
| SNX11-002 | OTTHUMT00000443421.1 | 1601 | 126aa | OTTHUMP00000260070 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | B4DJI7 | |
| SNX11-010 | OTTHUMT00000443429.2 | 922 | 254aa | OTTHUMP00000260076 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | J3QLV8 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| SNX11-011 | OTTHUMT00000443430.2 | 627 | 177aa | OTTHUMP00000260077 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | J3KTN6 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| SNX11-014 | OTTHUMT00000443418.2 | 563 | 172aa | OTTHUMP00000260068 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | J3QRB9 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| SNX11-005 | OTTHUMT00000443422.1 | 2300 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| SNX11-007 | OTTHUMT00000443425.1 | 1426 | 46aa | OTTHUMP00000260072 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | J3QRW4 | |
| SNX11-013 | OTTHUMT00000443427.1 | 965 | 57aa | OTTHUMP00000260074 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | J3QKV3 | |
| SNX11-008 | OTTHUMT00000443419.1 | 571 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| SNX11-009 | OTTHUMT00000443424.1 | 704 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SNX11-012 | OTTHUMT00000443431.1 | 358 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
