Description
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2
Location
Chromosome 17: 63,832,084-63,842,940 reverse strand.
About this transcript
This transcript has 13 exons and is annotated with 11 domains and features.
Gene
This transcript is a product of gene OTTHUMG00000179045 Show transcript tableHide transcript table
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| SMARCD2-001 | OTTHUMT00000444544.1 | 2716 | 531aa | OTTHUMP00000260607 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS45756 | Q92925 | |
| SMARCD2-003 | OTTHUMT00000444546.1 | 1935 | 483aa | OTTHUMP00000260608 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS82188 | - | |
| SMARCD2-002 | OTTHUMT00000444547.1 | 1800 | 456aa | OTTHUMP00000260609 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS82187 | J3KMX2 | |
| SMARCD2-012 | OTTHUMT00000444548.1 | 993 | 231aa | OTTHUMP00000260610 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | J3QWB6 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| SMARCD2-005 | OTTHUMT00000444555.3 | 449 | 69aa | OTTHUMP00000260613 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| SMARCD2-004 | OTTHUMT00000444545.1 | 2228 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| SMARCD2-006 | OTTHUMT00000444550.1 | 1017 | 80aa | OTTHUMP00000260611 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | |
| SMARCD2-007 | OTTHUMT00000444553.1 | 477 | 109aa | OTTHUMP00000260612 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | J3QQL7 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| SMARCD2-010 | OTTHUMT00000444549.1 | 821 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SMARCD2-009 | OTTHUMT00000444551.1 | 595 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SMARCD2-011 | OTTHUMT00000444552.1 | 562 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SMARCD2-008 | OTTHUMT00000444554.1 | 394 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
