Transcript: PDCD5-002 OTTHUMT00000450322.3

Description

programmed cell death 5

Location

Chromosome 19: 32,581,201-32,587,387 forward strand.

About this transcript

This transcript has 4 exons and is annotated with 5 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000180224 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt
PDCD5-001	OTTHUMT00000450320.2	699	125aa	OTTHUMP00000263700	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS12423	O14737
PDCD5-002	OTTHUMT00000450322.3	1799	129aa	OTTHUMP00000274201	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-
PDCD5-008	OTTHUMT00000450325.1	601	87aa	OTTHUMP00000263705	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	K7EQA1
PDCD5-006	OTTHUMT00000450323.1	468	65aa	OTTHUMP00000263703	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	K7ESJ4
PDCD5-003	OTTHUMT00000450324.1	154	40aa	OTTHUMP00000263704	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	Q3HM38
PDCD5-011	OTTHUMT00000472128.2	5254	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
PDCD5-010	OTTHUMT00000451976.1	558	55aa	OTTHUMP00000264656	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	X6R2P6
PDCD5-005	OTTHUMT00000450327.2	480	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
PDCD5-007	OTTHUMT00000450328.1	458	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 4 Transcript length: 1,799 bps Translation length: 129 residues

Class

Novel protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 3, last modified on 28/02/2014 (Created on 12/04/2012)

Alternative symbols

CTC-379B2.2-002

Other assemblies

This transcript maps to 32,581,201-32,587,387 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000419343

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: PDCD5-002 OTTHUMT00000450322.3

Summary

Transcript-based displays