Transcript: ALG1-011 OTTHUMT00000460417.2

Description

asparagine-linked glycosylation 1, beta-1,4-mannosyltransferase homolog (S. cerevisiae)

Location

Chromosome 16: 5,071,822-5,077,469 forward strand.

About this transcript

This transcript has 5 exons and is annotated with 6 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000129529 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
ALG1-012	OTTHUMT00000481659.1	2671	353aa	OTTHUMP00000278483	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS81946	-
ALG1-001	OTTHUMT00000251716.3	2132	464aa	OTTHUMP00000159923	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS10528	Q9BT22
ALG1-003	OTTHUMT00000435452.1	1419	353aa	OTTHUMP00000255896	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS81946	-
ALG1-010	OTTHUMT00000460418.2	742	167aa	OTTHUMP00000268877	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	K7EID2	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
ALG1-011	OTTHUMT00000460417.2	582	184aa	OTTHUMP00000268876	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	K7EPU3	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
ALG1-002	OTTHUMT00000435451.1	1689	84aa	OTTHUMP00000255895	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	K7EQK1
ALG1-008	OTTHUMT00000439886.2	1473	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
ALG1-009	OTTHUMT00000440193.1	569	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 5 Transcript length: 582 bps Translation length: 184 residues

Class

Novel protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 09/07/2015 (Created on 01/06/2012)

Alternative symbols

AC026458.7-011

Remarks

CDS end not found

mRNA end not found

Other assemblies

This transcript maps to 5,071,822-5,077,469 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000586840

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: ALG1-011 OTTHUMT00000460417.2

Summary

Transcript-based displays