Transcript: NOTCH3-005 OTTHUMT00000465715.1

Description

notch 3

Location

About this transcript

This transcript has 5 exons and is annotated with 3 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
NOTCH3-001	OTTHUMT00000465714.2	8666	2321aa	OTTHUMP00000271209	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS12326	Q9UM47
NOTCH3-002	OTTHUMT00000465717.2	3858	1286aa	OTTHUMP00000271212	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	M0R3C9	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete
NOTCH3-006	OTTHUMT00000465716.1	559	177aa	OTTHUMP00000271211	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
NOTCH3-005	OTTHUMT00000465715.1	564	117aa	OTTHUMP00000271210	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
NOTCH3-004	OTTHUMT00000465718.1	748	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
NOTCH3-003	OTTHUMT00000465719.1	558	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 5 Transcript length: 564 bps Translation length: 117 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 07/08/2012)

Alternative symbols

AC004663.1-005

Remarks

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 15,161,625-15,170,150 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000595514

Curation Method

Manual annotation from Havana