Transcript: LSM4-001 OTTHUMT00000466321.1

Description

LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)

Location

About this transcript

This transcript has 5 exons and is annotated with 6 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
LSM4-001	OTTHUMT00000466321.1	1908	139aa	OTTHUMP00000271528	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS12374	Q9Y4Z0
LSM4-006	OTTHUMT00000466322.5	986	125aa	OTTHUMP00000273716	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS62601	U3KQK1
LSM4-004	OTTHUMT00000466324.9	807	238aa	OTTHUMP00000274054	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	V9GZ56	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
LSM4-005	OTTHUMT00000466325.3	446	109aa	OTTHUMP00000273718	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	U3KQS7	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
LSM4-003	OTTHUMT00000466323.2	1113	69aa	OTTHUMP00000271529	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	M0QXB0
LSM4-002	OTTHUMT00000466326.2	656	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 5 Transcript length: 1,908 bps Translation length: 139 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS12374

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 08/08/2012)

Alternative symbols

CTC-251H24.6-001

Other assemblies

This transcript maps to 18,306,230-18,323,274 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000593829

Curation Method

Manual annotation from Havana