Transcript: CASP9-005 OTTHUMT00000006442.2

Description

caspase 9, apoptosis-related cysteine peptidase

Location

Chromosome 1: 15,504,625-15,524,217 reverse strand.

About this transcript

This transcript has 5 exons and is annotated with 16 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000002256 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	CCDS	UniProt	Flags
CASP9-001	OTTHUMT00000006438.1	2019	416aa	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS158	P55211
CASP9-002	OTTHUMT00000006439.2	1621	266aa	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS59995	-
CASP9-008	OTTHUMT00000407261.1	1351	333aa	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS159	-
CASP9-009	OTTHUMT00000407260.1	4463	421aa	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	F8VVS7
CASP9-003	OTTHUMT00000006440.3	954	266aa	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	Q5JRU2	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
CASP9-005	OTTHUMT00000006442.2	781	254aa	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	Q5JRU8	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
CASP9-007	OTTHUMT00000085423.1	740	198aa	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	H0Y6Y2	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
CASP9-004	OTTHUMT00000006441.4	725	47aa	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
CASP9-010	OTTHUMT00000407259.1	6172	No protein	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
CASP9-006	OTTHUMT00000006443.2	1878	152aa	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	H0Y3S8	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
CASP9-011	OTTHUMT00000407262.1	1111	95aa	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	F8VWA5
CASP9-012	OTTHUMT00000407263.1	569	No protein	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Loading component

Statistics

Exons: 5 Transcript length: 781 bps Translation length: 254 residues

Class

Novel protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 09/07/2015 (Created on 21/10/2003)

Alternative symbols

RP11-265F14.3-005

Remarks

CDS end not found

mRNA end not found

Other assemblies

This transcript maps to 15,504,625-15,524,217 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000440484

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: CASP9-005 OTTHUMT00000006442.2

Summary

Transcript-based displays