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Summary
- Splice variants
- Transcript comparison
Sequence
Comparative Genomics
- Genomic alignments
- Orthologues
- Alt. alleles
Ontologies
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Gene: Cldnd1 OTTMUSG00000028494

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Description

claudin domain containing 1

Location

Chromosome 16: 58,727,910-58,734,251 forward strand.

About this gene

This gene has 6 transcripts (splice variants) and 1 orthologue.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Cldnd1-001	OTTMUST00000070621.2	2147	253aa	OTTMUSP00000036016	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS28234	Q9CQX5
Cldnd1-002	OTTMUST00000070681.1	1540	253aa	OTTMUSP00000036060	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS28234	Q9CQX5
Cldnd1-005	OTTMUST00000071205.2	491	123aa	OTTMUSP00000036434	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	E0CY63	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Cldnd1-003	OTTMUST00000070682.1	805	99aa	OTTMUSP00000036061	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	E0CY66
Cldnd1-006	OTTMUST00000071206.1	581	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Cldnd1-004	OTTMUST00000070683.1	597	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

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Summary

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