Transcript: Slc22a23-005 OTTMUST00000085277.1

Description

solute carrier family 22, member 23

Location

About this transcript

This transcript has 5 exons.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Slc22a23-001	OTTMUST00000085272.1	6251	689aa	OTTMUSP00000046051	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS26446	Q3UHH2
Slc22a23-002	OTTMUST00000085274.1	5011	566aa	OTTMUSP00000046053	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	F7BP73	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Slc22a23-003	OTTMUST00000085275.1	4103	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
Slc22a23-004	OTTMUST00000085276.1	786	182aa	OTTMUSP00000046054	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Slc22a23-005	OTTMUST00000085277.1	503	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Slc22a23-006	OTTMUST00000085278.1	707	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 5 Transcript length: 503 bps

Class

processed transcript [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 19/07/2012 (Created on 12/11/2008)

Alternative symbols

RP23-435I6.2-005

Other assemblies

This transcript maps to 34,221,370-34,344,203 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000143353

Curation Method

Manual annotation from Havana