Transcript: Plod1-001 OTTMUST00000024908.2

Description

procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1

Location

About this transcript

This transcript has 19 exons and is annotated with 10 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Plod1-001	OTTMUST00000024908.2	3243	728aa	OTTMUSP00000011428	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS18924	Q9R0E2
Plod1-007	OTTMUST00000064403.1	1059	226aa	OTTMUSP00000031969	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-
Plod1-005	OTTMUST00000024912.11	805	269aa	OTTMUSP00000011429	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete
Plod1-002	OTTMUST00000024909.3	358	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Plod1-006	OTTMUST00000064402.3	4097	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Plod1-004	OTTMUST00000024911.1	512	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 19 Transcript length: 3,243 bps Translation length: 728 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS18924

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 10/03/2012 (Created on 25/04/2005)

Alternative symbols

RP23-406N5.6-001

Remarks

NP_035252

Other assemblies

This transcript maps to 147,909,753-147,936,767 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000019199

Curation Method

Manual annotation from Havana