Transcript: Cacfd1-001 OTTMUST00000027831.1

Description

likely ortholog of H. sapiens chromosome 9 open reading frame 7 (C9orf7)

Location

About this transcript

This transcript has 6 exons and is annotated with 7 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Cacfd1-002	OTTMUST00000027832.1	2689	171aa	OTTMUSP00000012643	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS38086	Q8BG21
Cacfd1-003	OTTMUST00000027833.1	2194	106aa	OTTMUSP00000012644	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS57161	-
Cacfd1-001	OTTMUST00000027831.1	1648	171aa	OTTMUSP00000012642	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS38086	Q8BG21
Cacfd1-004	OTTMUST00000027834.1	1286	128aa	OTTMUSP00000012645	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS57160	-
Cacfd1-007	OTTMUST00000027837.2	727	109aa	OTTMUSP00000031268	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	A6PWX1
Cacfd1-008	OTTMUST00000027838.2	645	118aa	OTTMUSP00000031269	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	F7CPS9	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Cacfd1-005	OTTMUST00000027835.1	415	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Cacfd1-006	OTTMUST00000027836.1	384	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 6 Transcript length: 1,648 bps Translation length: 171 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS38086

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 10/03/2012 (Created on 20/05/2005)

Alternative symbols

RP23-449M10.1-001

Remarks

D530007N05Rik

Other assemblies

This transcript maps to 27,009,926-27,021,089 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000114006

Curation Method

Manual annotation from Havana