Transcript: Zgpat-001 OTTMUST00000040294.1

Description

zinc finger, CCCH-type with G patch domain

Location

About this transcript

This transcript has 7 exons and is annotated with 18 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Zgpat-001	OTTMUST00000040294.1	2293	511aa	OTTMUSP00000018003	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS17210	Q8VDM1
Zgpat-002	OTTMUST00000040295.2	2072	511aa	OTTMUSP00000018004	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS17210	Q8VDM1
Zgpat-005	OTTMUST00000040479.1	793	185aa	OTTMUSP00000018093	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	F7C2Y9	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Zgpat-006	OTTMUST00000078183.1	3666	511aa	OTTMUSP00000041548	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	CCDS17210	Q8VDM1
Zgpat-003	OTTMUST00000040296.2	4892	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Zgpat-004	OTTMUST00000040297.1	679	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 7 Transcript length: 2,293 bps Translation length: 511 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS17210

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 10/03/2012 (Created on 07/04/2006)

Alternative symbols

RP23-60M5.3-001

Other assemblies

This transcript maps to 181,364,928-181,380,794 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000029105

Curation Method

Manual annotation from Havana