Transcript: Smyd5-001 OTTMUST00000042294.2

Description

SET and MYND domain containing 5

Location

Chromosome 6: 85,431,989-85,446,435 forward strand.

About this transcript

This transcript has 13 exons and is annotated with 16 domains and features.

Gene

This transcript is a product of gene OTTMUSG00000017438 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt
Smyd5-001	OTTMUST00000042294.2	2486	416aa	OTTMUSP00000019005	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS51827	Q3TYX3
Smyd5-006	OTTMUST00000042299.1	613	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Smyd5-005	OTTMUST00000042298.1	477	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Smyd5-008	OTTMUST00000142123.1	2812	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Smyd5-004	OTTMUST00000042297.1	964	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Smyd5-003	OTTMUST00000042296.1	830	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Smyd5-007	OTTMUST00000142122.1	746	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Smyd5-002	OTTMUST00000042295.1	704	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 13 Transcript length: 2,486 bps Translation length: 416 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS51827

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 04/06/2015 (Created on 08/06/2006)

Alternative symbols

RP24-162H1.1-001

Other assemblies

This transcript maps to 85,431,989-85,446,435 in GRCm38 (Ensembl) coordinates.

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Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000045693

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: Smyd5-001 OTTMUST00000042294.2

Summary

Transcript-based displays