Transcript: Spg20-003 OTTMUST00000066033.1

Description

spastic paraplegia 20, spartin (Troyer syndrome) homolog (human)

Location

Chromosome 3: 55,112,166-55,137,317 forward strand.

About this transcript

This transcript has 9 exons and is annotated with 12 domains and features.

Gene

This transcript is a product of gene OTTMUSG00000026686 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Spg20-003	OTTMUST00000066033.1	3981	671aa	OTTMUSP00000033005	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS38432	Q3TVW1
Spg20-001	OTTMUST00000066031.1	3770	671aa	OTTMUSP00000033003	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS38432	Q3TVW1
Spg20-002	OTTMUST00000066032.1	3567	614aa	OTTMUSP00000033004	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS50908	-
Spg20-004	OTTMUST00000066034.1	2957	582aa	OTTMUSP00000033006	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-
Spg20-006	OTTMUST00000066036.3	473	116aa	OTTMUSP00000033008	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Spg20-005	OTTMUST00000066035.3	368	92aa	OTTMUSP00000033007	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Spg20-007	OTTMUST00000132772.1	3239	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Spg20-008	OTTMUST00000132773.1	2115	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 9 Transcript length: 3,981 bps Translation length: 671 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS38432

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 01/10/2013 (Created on 13/07/2007)

Alternative symbols

AC111132.3-003

Remarks

alternative 5' UTR

Other assemblies

This transcript maps to 55,112,166-55,137,317 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000118118

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: Spg20-003 OTTMUST00000066033.1

Summary

Transcript-based displays