Transcript: Srrm3-001 OTTMUST00000073094.1

Description

serine/arginine repetitive matrix 3

Location

Chromosome 5: 135,818,106-135,874,772 forward strand.

About this transcript

This transcript has 15 exons and is annotated with 17 domains and features.

Gene

This transcript is a product of gene OTTMUSG00000029498 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Srrm3-001	OTTMUST00000073094.1	3932	648aa	OTTMUSP00000037801	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS39319	Q80WV7
Srrm3-005	OTTMUST00000073098.2	526	124aa	OTTMUSP00000037803	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Srrm3-002	OTTMUST00000073095.1	3342	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
Srrm3-003	OTTMUST00000073096.1	2289	342aa	OTTMUSP00000037802	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
Srrm3-004	OTTMUST00000073097.1	1995	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Srrm3-006	OTTMUST00000073099.1	681	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Srrm3-007	OTTMUST00000073100.1	567	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 15 Transcript length: 3,932 bps Translation length: 648 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS39319

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 03/10/2014 (Created on 29/10/2007)

Alternative symbols

AC084162.4-001

Other assemblies

This transcript maps to 135,818,106-135,874,772 in GRCm38 (Ensembl) coordinates.

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Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000144211

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: Srrm3-001 OTTMUST00000073094.1

Summary

Transcript-based displays