Transcript: Prpf3-002 OTTMUST00000075940.1

Description

PRP3 pre-mRNA processing factor 3 homolog (yeast)

Location

Chromosome 3: 95,830,622-95,855,753 reverse strand.

About this transcript

This transcript has 16 exons and is annotated with 15 domains and features.

Gene

This transcript is a product of gene OTTMUSG00000030680 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Prpf3-001	OTTMUST00000075939.1	2933	683aa	OTTMUSP00000039899	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS17621	Q922U1
Prpf3-002	OTTMUST00000075940.1	2732	683aa	OTTMUSP00000039900	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS17621	Q922U1
Prpf3-010	OTTMUST00000078710.2	575	114aa	OTTMUSP00000041893	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	F6T4V0	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Prpf3-006	OTTMUST00000075944.2	800	101aa	OTTMUSP00000041221	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	E0CYD0
Prpf3-009	OTTMUST00000078708.3	554	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Prpf3-003	OTTMUST00000075941.3	2548	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Prpf3-007	OTTMUST00000075945.1	1800	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Prpf3-005	OTTMUST00000075943.2	613	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Prpf3-008	OTTMUST00000075946.1	592	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 16 Transcript length: 2,732 bps Translation length: 683 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS17621

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 17/07/2013 (Created on 07/01/2008)

Alternative symbols

AC093317.3-002

Remarks

alternative 5' UTR

E430005P14Rik

Other assemblies

This transcript maps to 95,830,622-95,855,753 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000161476

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: Prpf3-002 OTTMUST00000075940.1

Summary

Transcript-based displays