Transcript: Senp1-002 OTTMUST00000112812.1

Description

SUMO1/sentrin specific peptidase 1

Location

Chromosome 15: 98,041,733-98,093,251 reverse strand.

About this transcript

This transcript has 19 exons and is annotated with 16 domains and features.

Gene

This transcript is a product of gene OTTMUSG00000042971 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Senp1-001	OTTMUST00000112809.1	6575	640aa	OTTMUSP00000063186	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS49717	P59110
Senp1-002	OTTMUST00000112812.1	3806	666aa	OTTMUSP00000063188	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	M0QWX4
Senp1-008	OTTMUST00000114626.3	518	21aa	OTTMUSP00000063973	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	S4R1V9	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Senp1-003	OTTMUST00000112811.1	3882	130aa	OTTMUSP00000063187	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	M0QWV7
Senp1-006	OTTMUST00000112815.1	1270	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Senp1-009	OTTMUST00000116974.1	853	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Senp1-007	OTTMUST00000112813.1	568	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Senp1-005	OTTMUST00000112810.1	4886	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Senp1-004	OTTMUST00000112814.1	2830	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 19 Transcript length: 3,806 bps Translation length: 666 residues

Class

Novel protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 03/08/2012 (Created on 03/08/2012)

Alternative symbols

RP23-268C9.1-002

Other assemblies

This transcript maps to 98,041,733-98,093,251 in GRCm38 (Ensembl) coordinates.

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Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000180657

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: Senp1-002 OTTMUST00000112812.1

Summary

Transcript-based displays