Transcript: Rps13-001 OTTMUST00000144357.1

Description

ribosomal protein S13

Location

Chromosome 7: 116,331,505-116,334,195 reverse strand.

About this transcript

This transcript has 6 exons and is annotated with 8 domains and features.

Gene

This transcript is a product of gene OTTMUSG00000058788 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt
Rps13-001	OTTMUST00000144357.1	589	151aa	OTTMUSP00000075252	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS52370	Q5BLJ7
Rps13-004	OTTMUST00000144358.1	1317	140aa	OTTMUSP00000075253	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	Q921R2
Rps13-002	OTTMUST00000144362.1	1150	53aa	OTTMUSP00000075254	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	A0A0U1RQ71
Rps13-003	OTTMUST00000144361.1	2363	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Rps13-005	OTTMUST00000144363.1	1927	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Rps13-007	OTTMUST00000144364.1	958	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Rps13-006	OTTMUST00000144360.1	653	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Rps13-008	OTTMUST00000144359.1	428	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 6 Transcript length: 589 bps Translation length: 151 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS52370

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 29/07/2015 (Created on 29/07/2015)

Alternative symbols

RP23-335G1.2-001

Other assemblies

This transcript maps to 116,331,505-116,334,195 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000170953

Curation Method

Manual annotation from Havana

Select a species

Recent locations

Transcript: Rps13-001 OTTMUST00000144357.1

Summary

Transcript-based displays