Transcript: HMMR-004 OTTSUST00000004877.3

Description

hyaluronan-mediated motility receptor (RHAMM)

Location

Chromosome 16: 65,132,173-65,172,242 reverse strand.

About this transcript

This transcript has 15 exons and is annotated with 16 domains and features.

Gene

This transcript is a product of gene OTTSUSG00000002356 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	Flags
HMMR-001	OTTSUST00000004875.2	3313	713aa	OTTSUSP00000003561	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding
HMMR-004	OTTSUST00000004877.3	2068	626aa	OTTSUSP00000003563	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding
HMMR-005	OTTSUST00000004876.1	1967	606aa	OTTSUSP00000003562	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
HMMR-008	OTTSUST00000007786.1	1308	436aa	OTTSUSP00000005853	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
HMMR-006	OTTSUST00000007789.1	665	199aa	OTTSUSP00000005855	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
HMMR-009	OTTSUST00000007787.1	629	68aa	OTTSUSP00000005854	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay
HMMR-003	OTTSUST00000004878.1	1310	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron
HMMR-007	OTTSUST00000007788.1	1243	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron

Summary

Statistics

Exons: 15 Transcript length: 2,068 bps Translation length: 626 residues

Class

Novel protein coding [Definition]

Author

This transcript was annotated by IRAG

Version & date

Version 3, last modified on 27/04/2012 (Created on 18/10/2010)

Alternative symbols

CH242-321D12.1-004

Remarks

not organism-supported

upstream ATG

Other assemblies

This transcript maps to 65,132,173-65,172,242 in Sscrofa10.2 (Ensembl) coordinates.

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Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSSSCT00000034673

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: HMMR-004 OTTSUST00000004877.3

Summary

Transcript-based displays