Description
SPOC domain containing 1
Synonyms
PPP1R146, FLJ25348
Location
Chromosome 1: 31,790,422-31,816,051 reverse strand.
VEGA68:CM000663.2
About this gene
This gene has 15 transcripts (splice variants).
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| SPOCD1-007 | OTTHUMT00000381912.1 | 3960 | 1216aa | OTTHUMP00000228471 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS347 | Q6ZMY3 | |
| SPOCD1-008 | OTTHUMT00000381914.1 | 3774 | 1203aa | OTTHUMP00000228473 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS60066 | - | |
| SPOCD1-001 | OTTHUMT00000011053.1 | 2472 | 696aa | OTTHUMP00000003954 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS72748 | - | |
| SPOCD1-013 | OTTHUMT00000381913.1 | 2105 | 639aa | OTTHUMP00000228472 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | E9PPM7 | |
| SPOCD1-015 | OTTHUMT00000381915.2 | 765 | 255aa | OTTHUMP00000228474 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | H0YF46 | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete |
| SPOCD1-011 | OTTHUMT00000381918.2 | 563 | 43aa | OTTHUMP00000228475 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| SPOCD1-009 | OTTHUMT00000381919.1 | 487 | 87aa | OTTHUMP00000228476 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| SPOCD1-010 | OTTHUMT00000381920.3 | 477 | 20aa | OTTHUMP00000228477 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| SPOCD1-003 | OTTHUMT00000011206.1 | 1679 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| SPOCD1-002 | OTTHUMT00000011205.2 | 2879 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SPOCD1-006 | OTTHUMT00000011209.1 | 2667 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SPOCD1-004 | OTTHUMT00000011207.1 | 2625 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SPOCD1-005 | OTTHUMT00000011208.1 | 1938 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SPOCD1-012 | OTTHUMT00000381917.1 | 581 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SPOCD1-014 | OTTHUMT00000381916.1 | 525 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
