Description
contactin associated protein-like 3B
Location
Chromosome 9: 41,890,314-42,129,510 reverse strand.
VEGA68:CM000671.2
About this gene
This gene has 15 transcripts (splice variants), 11 orthologues and 9 paralogues.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| CNTNAP3B-001 | OTTHUMT00000036930.6 | 5379 | 1288aa | OTTHUMP00000275933 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS75836 | A0A087WUH3 | |
| CNTNAP3B-013 | OTTHUMT00000477547.1 | 7455 | 1207aa | OTTHUMP00000276808 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | A0A087X119 | |
| CNTNAP3B-003 | OTTHUMT00000129770.4 | 3240 | 380aa | OTTHUMP00000064575 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | |
| CNTNAP3B-009 | OTTHUMT00000143897.4 | 2666 | 745aa | OTTHUMP00000276812 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | A0A087WXL9 | |
| CNTNAP3B-004 | OTTHUMT00000477527.2 | 2643 | 180aa | OTTHUMP00000276799 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | A0A087X0T4 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| CNTNAP3B-014 | OTTHUMT00000477549.1 | 2170 | 652aa | OTTHUMP00000276811 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | A0A087WUG9 | |
| CNTNAP3B-008 | OTTHUMT00000143896.4 | 501 | 167aa | OTTHUMP00000276810 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | A0A087X2E4 | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete |
| CNTNAP3B-012 | OTTHUMT00000477548.1 | 3840 | 966aa | OTTHUMP00000276809 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | A0A087WZ03 | |
| CNTNAP3B-011 | OTTHUMT00000143899.5 | 2426 | 605aa | OTTHUMP00000070187 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | F2Z2X5 | |
| CNTNAP3B-005 | OTTHUMT00000143893.4 | 549 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| CNTNAP3B-010 | OTTHUMT00000143898.2 | 438 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| CNTNAP3B-015 | OTTHUMT00000477531.2 | 290 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| CNTNAP3B-002 | OTTHUMT00000129769.4 | 5256 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| CNTNAP3B-007 | OTTHUMT00000143895.3 | 1238 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| CNTNAP3B-006 | OTTHUMT00000143894.3 | 742 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
