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Summary
- Splice variants
- Transcript comparison
Sequence
Comparative Genomics
- Genomic alignments
- Orthologues
- Alt. alleles
Ontologies
- GO: Cellular component
- GO: Biological process
- GO: Molecular function
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Gene: SFTPA1 OTTHUMG00000018565

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Description

surfactant protein A1

Synonyms

COLEC4, SP-A1, SP-A

Location

Chromosome 10: 79,610,939-79,615,455 forward strand.

VEGA68:CM000672.2

About this gene

This gene has 6 transcripts (splice variants), 4 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Biotype	CCDS	Flags
SFTPA1-008	OTTHUMT00000048958.3	2210	263aa	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS44444
SFTPA1-009	OTTHUMT00000048957.1	596	158aa	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
SFTPA1-007	OTTHUMT00000048960.3	527	158aa	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
SFTPA1-012	OTTHUMT00000367915.1	1261	No protein	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-
SFTPA1-010	OTTHUMT00000048956.2	934	No protein	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-
SFTPA1-011	OTTHUMT00000048959.1	342	No protein	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-

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Summary

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